dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001666_4|CGC1
Gene ID: MGYG000001666_00144
Location and strand information: 57 - 2141 (-)
Family: GH10
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.3571
Protein molecular weight: 77181.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001666_4|CGC1
Gene ID: MGYG000001666_00145
Location and strand information: 2182 - 3258 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001666_4|CGC1
Gene ID: MGYG000001666_00146
Location and strand information: 3290 - 5044 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001666_4|CGC1
Gene ID: MGYG000001666_00147
Location and strand information: 5063 - 7885 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001666_4|CGC1
Gene ID: MGYG000001666_00148
Location and strand information: 7912 - 9828 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001666_4|CGC1
Gene ID: MGYG000001666_00149
Location and strand information: 9840 - 12974 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001666_4|CGC1
Gene ID: MGYG000001666_00150
Location and strand information: 13182 - 14900 (-)
Family: GH43_12|GH43
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43A
Protein isoelectric point: 6.272
Protein molecular weight: 62817.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001666_4|CGC1
Gene ID: MGYG000001666_00151
Location and strand information: 15355 - 16992 (-)
Family: GH43_10|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8141
Protein molecular weight: 60927.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001666_4|CGC1
Gene ID: MGYG000001666_00152
Location and strand information: 17267 - 21247 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001666_4|CGC1
Gene ID: MGYG000001666_00153
Location and strand information: 21226 - 25290 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001666_4|CGC1
Gene ID: MGYG000001666_00154
Location and strand information: 25559 - 27280 (+)
Family: GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.0382
Protein molecular weight: 64028.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001666_4|CGC1
Gene ID: MGYG000001666_00155
Location and strand information: 27287 - 28954 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001666_4|CGC1
Gene ID: MGYG000001666_00156
Location and strand information: 28971 - 30401 (+)
Family: 2.A.2.3.2
Protein type: TC
Protein description: Glucuronide carrier protein

Gene clsuter ID: MGYG000001666_4|CGC1
Gene ID: MGYG000001666_00157
Location and strand information: 30414 - 31541 (+)
Family: GH10
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase A
Protein isoelectric point: 4.601
Protein molecular weight: 42369.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001666_4|CGC1
Gene ID: MGYG000001666_00158
Location and strand information: 31538 - 32512 (+)
Family: GH43|GH43_1
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 4.654
Protein molecular weight: 36994.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001666_4|CGC1
Gene ID: MGYG000001666_00159
Location and strand information: 32505 - 34358 (+)
Family: GH67
Protein type: CAZyme
Protein description: Extracellular xylan exo-alpha-(1->2)-glucuronosidase
Protein isoelectric point: 6.3774
Protein molecular weight: 69804.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001666_00144	hypothetical protein	CAZyme	57	2141	-	GH10
MGYG000001666_00145	hypothetical protein	null	2182	3258	-	DUF1735\| DUF5627
MGYG000001666_00146	hypothetical protein	null	3290	5044	-	SusD-like_3\| SusD_RagB
MGYG000001666_00147	hypothetical protein	TC	5063	7885	-	1.B.14.6.1
MGYG000001666_00148	hypothetical protein	null	7912	9828	-	SusD-like_3\| SusD_RagB
MGYG000001666_00149	hypothetical protein	TC	9840	12974	-	1.B.14.6.1
MGYG000001666_00150	Non-reducing end alpha-L-arabinofuranosidase BoGH43A	CAZyme	13182	14900	-	GH43_12\| GH43
MGYG000001666_00151	hypothetical protein	CAZyme	15355	16992	-	GH43_10\| GH43
MGYG000001666_00152	Sensor histidine kinase RcsC	TF	17267	21247	+	HTH_AraC+HTH_AraC
MGYG000001666_00153	Sensor histidine kinase RcsC	TF	21226	25290	-	HTH_AraC+HTH_AraC
MGYG000001666_00154	hypothetical protein	CAZyme	25559	27280	+	GH35
MGYG000001666_00155	hypothetical protein	null	27287	28954	+	Glyco_hydro_2_N\| SASA
MGYG000001666_00156	Glucuronide carrier protein	TC	28971	30401	+	2.A.2.3.2
MGYG000001666_00157	Endo-1,4-beta-xylanase A	CAZyme	30414	31541	+	GH10
MGYG000001666_00158	Xylosidase/arabinosidase	CAZyme	31538	32512	+	GH43\| GH43_1
MGYG000001666_00159	Extracellular xylan exo-alpha-(1->2)-glucuronosidase	CAZyme	32505	34358	+	GH67
Protein ID	Protein Name	Type	Start	End	Strand	Signature

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001666_00144	GH10_e9\|3.2.1.8	xylan
MGYG000001666_00150	GH43_e50\|3.2.1.55	xylan
MGYG000001666_00151	GH43_e221\|3.2.1.55	xylan
MGYG000001666_00154	GH35_e24
MGYG000001666_00157	GH10_e61
MGYG000001666_00158	GH43_e85\|3.2.1.55\|3.2.1.37	xylan
MGYG000001666_00159	GH67_e0\|3.2.1.139\|3.2.1.131\|3.2.1.-	xylan